Theory & Data Analysis Tools

Python package for simulation and analysis of neuronal networks using the NEURON simulator.

BRAIN Project: EB022903

Open-source Python package for analysis of neuroelectrophysiology data.

BRAIN Project: NSF1550994

Functions for estimating structural equation models using instrumental variables.

BRAIN Project: EB022904

Monte Carlo simulator of cellular microphysiology.

BRAIN Project: NSF1707356

Performs causal mediation analysis under confounding or correlated errors.

BRAIN Project: EB022911

Performs Granger mediation analysis (GMA) for time series.

BRAIN Project: EB022911

Automated identification of relationships in time series data from within a structural equation modeling framework.

BRAIN Project: EB022904

Website portal for visualization and analysis of multi-omic data.

BRAIN Project: MH114788.

Crowdsourced game and atlas for mapping single neurons.

BRAIN Project: IARPA-D16PC00005

BRAIN Project: NIH-U01NS090562

Cloud-based analysis software for cell population microscopy images. 

BRAIN Project: NSF1533708