Resources

Summary

BRAIN Initiative Webinar Series
Contact: kari.ashmont@nih.gov

Program
  • Public-Private Partnerships
Resource Type
  • Grant Application Resource
Priority Area
  • Human Neuroscience
  • Interventional Tools
  • Monitor Neural Activity
Summary

This template document can be signed by academic researchers to allow confidential discussions of proprietary details with a given company regarding the capabilities of a device for the conduct of clinical research.

Project Number
Project Number
RAVE: A New Open Software Tool for Analysis and Visualization of Electrocorticography Data
Program
  • Informatics
Resource Type
  • Research tool: Software
Priority Area
  • Cell Type
  • Circuit Diagrams
  • Human Neuroscience
  • Integrated Approaches
  • Interventional Tools
  • Monitor Neural Activity
  • Theory & Data Analysis Tools
Summary

R Analysis and Visualization of intracranial EEG (RAVE) is free and open-source software for the analysis of intracranial electroencephalogram (iEEG) data, including data collected using strips and grids (electrocorticography, ECoG) and depth electrodes (stereotactic EEG).

BRAIN Project: MH117529

Name
Samantha White
Contact
Email
samantha.white2@nih.gov
Resource Type
  • Overview
Priority Area
  • Cell Type
  • Circuit Diagrams
  • Human Neuroscience
  • Integrated Approaches
  • Interventional Tools
  • Monitor Neural Activity
  • Theory & Data Analysis Tools
Summary

Our brain is important to help us think, see, speak, feel, and understand the world around us. The BRAIN Initiative funds scientists to explore fundamental questions about the brain. Scientists learn by asking questions - give it a try using this web-based, interactive, educational experience called the BRAIN Explorer

Program
  • Cell Census Network (BICCN)
Resource Type
  • Research Tool
  • Research tool: Software
Priority Area
  • Cell Type
Summary

FastProject analyzes a gene expression matrix and produces a dynamic output report in which two-dimensional projections of the data can be explored. Annotated gene sets (referred to as 'signatures') are incorporated so that features in the projections can be understood in relation to the biological processes they might represent. FastProject provides a novel method of scoring each cell against a gene signature so as to minimize the effect of missed transcripts as well as a method to rank signature-projection pairings so that meaningful associations can be quickly identified.

Program
  • Cell Census Network (BICCN)
Resource Type
  • Research Tool
  • Research tool: Animals & Reagents
  • Research tool: Software
Priority Area
  • Cell Type
Summary

This Blueprint-funded Resource supports the design, creation, and characterization of Cre-recombinase-expressing ("Cre-Driver") mouse lines on the C57B1/6 background, which can be used to drive expression of reporter genes and conditional-ready alleles in the mouse nervous system. A MATLAB toolbox used in the paper that can be used to plug in other cell-type transcriptomes to infer their spatial distribution in the mouse brain.