Project Summary/Abstract Reuse of existing neuroscience data relies, in part, on our ability to understand the experimental design and study data. Historically, a description of the experiment is provided in textual documents, which are often difficult to search, lack the details necessary for data reuse, and are hampered by differences in terminologies across related fields of neuroscience.
Project Summary/Abstract ! Most genetic recorders described so far utilize the CRISPR/Cas9 system to leave a unique genetic scar in each cell that can be traced in daughter cells. However, since these systems are largely deletion based, there is a finite number of events and lineages that they can be used to trace. Hence all these recorders are fundamentally restricted in the number of lineages they can trace since development in mammals is a prolonged process, with radial glia in the brain dividing greater than 50 times.
Abstract The goal of this project is to develop an archival data format and a formal task specification language to serve as standards for describing behavioral experiments. Because different laboratories use different behavioral systems, hardware, and software, it has been difficult to communicate behavioral task design, share data, or reproduce experiments.
Neuroscientific data contain information from an incredible diversity of species, are generated by a plethora of devices, and encapsulate the results of scientific thinking and decision making. Most of this generated data remains confined within laboratories and is not accessible to the broader scientific community. The research projects awarded under the Brain Initiative are generating a diverse collection of data that can transform and accelerate the pace of discovery. These datasets are large--ranging in size from GBs to PBs-- and represent diverse data types and assorted metadata.
To take advantage of recent and ongoing advances in intensive and large-scale computational methods, and to preserve the scientific data created by publicly funded research projects, data archives must be created as well as standards for specifying, identifying, and annotating deposited data. The value of and interest in such archives among researchers can be greatly increased by adding to them an active computational capability and framework of analysis and search tools that support further analysis as well as larger scale meta-analysis and large scale data mining.
PROJECT SUMMARY A major goal of the BRAIN initiative is to understand neuronal connectivity and plasticity in the context of animal behavior. The functions and connectivity
Abstract Synaptic transmission is mainly mediated by classical neurotransmitters such as glutamate and g-amino butyric acid (GABA) which transduce fast information flow in the brain. This process is tightly regulated by neuromodu- lators including monoamines and neuropeptides.
Project Summary (maximum 30 lines) The BRAIN initiative seeks to develop and apply technologies in order to understand of how brain cells interact in both time and space to give rise to brain function.
PROJECT SUMMARY/ABSTRACT It is estimated that the human brain contains an overwhelming 1015 synapses, structures essential for the normal functioning of neural circuits. Our knowledge of the connections that form these critical signaling sites, in even the simplest vertebrate nervous systems, is sorely lacking.
Project Summary Developing new methodological and analytical tools to address currently insurmountable experimental questions is crucial to the future of neuroscience. While recent advances in two-photon microscopy and activity sensors have revolutionized our understanding of the cellular and circuit basis of behavior, many barriers still exist that preclude fully exploring the molecular basis of these processes in vivo.
